PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0026s0199.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 229aa    MW: 25344.6 Da    PI: 9.5568
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0026s0199.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.92.3e-3348102155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v gLt++hvkSHLQkYRl
  Kalax.0026s0199.1.p  48 KQRLRWTSDLHDRFVDAIAQLGGPDRATPKGVLRVMGVSGLTIYHVKSHLQKYRL 102
                          79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.81245105IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.1E-3246103IPR009057Homeodomain-like
SuperFamilySSF466894.3E-1747102IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-2648103IPR006447Myb domain, plants
PfamPF002492.4E-850101IPR001005SANT/Myb domain
PfamPF143791.3E-24135180IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MYQAKKFSTT NLIPHKAQGA ERVAIVTTPD ESTVKGTASS PPTSGNSKQR LRWTSDLHDR  60
FVDAIAQLGG PDRATPKGVL RVMGVSGLTI YHVKSHLQKY RLVKYLPESS ADGSKDDKKG  120
SGDSLSSLDS PPGLQINEAL RMQMEVQRRL HEQLEVQRQL QMRIEAQGKY LQKIIEEQQK  180
LGSTIKASEL EALDEEQPTS GAGGQSGPRK RLRIDVEEQS KVWDREDP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008392505.11e-102PREDICTED: protein PHR1-LIKE 1-like
RefseqXP_009347650.11e-101PREDICTED: protein PHR1-LIKE 1-like
RefseqXP_009347649.11e-101PREDICTED: protein PHR1-LIKE 1-like
RefseqXP_009345372.11e-101PREDICTED: protein PHR1-LIKE 1-like
SwissprotQ8GUN58e-50PHL1_ARATH; Protein PHR1-LIKE 1
TrEMBLM5VRH61e-100M5VRH6_PRUPE; Uncharacterized protein
STRINGVIT_08s0040g00100.t011e-96(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.17e-67G2-like family protein